Publications

Recent publications related to MisPred

Bányai L and Patthy L (2004) Evidence that human genes of modular proteins have retained significantly more ancestral introns than their fly or worm orthologues. FEBS Lett 565, 127-32.

Tordai H and Patthy L (2004) Insertion of spliceosomal introns in proto-splice sites: the case of secretory signal peptides. FEBS Lett 575, 109-11.

Barta E , Sebestyén E , Pálfy TB , Tóth G , Ortutay CP and Patthy L (2005) DoOP: Databases of Orthologous Promoters, collections of clusters of orthologous upstream sequences from chordates and plants. Nucleic Acids Res 33 Database Issue, D86-90.

Tordai H , Nagy A , Farkas K , Bányai L and Patthy L (2005) Modules, multidomain proteins and organismic complexity. FEBS J 272, 5064-78.

Patthy, L. (2006) Evolution of multidomain proteins. In: Evolutionary Genetics. Concepts and Case Studies. Edited by Charles W. Fox and Jason B. Wolf. University Press, pp. 211-0221

Tress ML, Martelli PL, Frankish A, Reeves GA, Wesselink JJ, Yeats C, Olason PL, Albrecht M, Hegyi H, Giorgetti A, Raimondo D, Lagarde J, Laskowski RA, Lopez G, Sadowski MI, Watson JD, Fariselli P, Rossi I, Nagy A, Kai W, Storling Z, Orsini M, Assenov Y, Blankenburg H, Huthmacher C, Ramirez F, Schlicker A, Denoeud F, Jones P, Kerrien S, Orchard S, Antonarakis SE, Reymond A, Birney E, Brunak S, Casadio R, Guigo R, Harrow J, Hermjakob H, Jones DT, Lengauer T, Orengo CA, Patthy L, Thornton JM, Tramontano A, Valencia A. (2007) The implications of alternative splicing in the ENCODE protein complement. Proc Natl Acad Sci U S A. 104, 5495-500.

Nagy A, Hegyi H, Farkas K, Tordai H, Kozma E, Bányai L and Patthy L. (2008) Identification and correction of abnormal, incomplete and mispredicted proteins in public databases. BMC Bioinformatics 9, 353.